SNP Profiles of SCA 11   View Data

 Show/Hide Profiles

 Key

 1234567891011121314
_Input profile
CCCCGGCCAAGGGGCCATAAGGAGGGAA
1._MITC-000057
CCCCGGCCAAGGGGCCAAAAAGGGGGAA
2._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
3._SCA_11
_____CCGG_AT_____
4._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
5._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
6._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
7._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
8._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
9._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
10._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
11._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
12._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
13._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
14._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
15._GC-01-117-6-14
CCCCGGCCTTCCGGGGATTTGGCTCCTT
16._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
17._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
18._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
19._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
20._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
21._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
22._SCA_11
_____CCGG_AT_____
23._SCA_11
_____CCGG_AT_____
24._SCA_11
_____CCGG_AT_____
25._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
26._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
27._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
28._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
29._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
30._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
31._GC-08-157-3-56
CCCCGGCCTTCCGGGGATTTGGCTCCTT
32._SCA_11
_____CCGG_AT_____
33._SCA_11
_____CCGG_AT_____
34._SCA_11
_____CCGG_AT_____
35._SCA_11
_____CCGG_AT_____
36._SCA_11
_____CCGG_AT_____
37._SCA_11
_____CCGG_AT_____
38._SCA_11
_____CCGG_AT_____
39._SCA_11
_____CCGG_AT_____
40._SCA_11
_____CCGG_AT_____
41._SCA_11
_____CCGG_AT_____
42._SCA_11
_____CCGG_AT_____
43._SCA_11
_____CCGG_AT_____
44._SCA_11
_____CCGG_AT_____
45._SCA_11
_____CCGG_AT_____
46._SCA_11
_____CCGG_AT_____
47._SCA_11
_____CCGG_AT_____
48._SCA_11
_____CCGG_AT_____
49._SCA_11
_____CCGG_AT_____
50._SCA_11
_____CCGG_AT_____
51._SCA_11
_____CCGG_AT_____
52._SCA_11
_____CCGG_AT_____
53._SCA_11
_____CCGG_AT_____
54._RUQ_374
_____CCGG_AA_____
55._SCA_11
_____CCGG_AA_____
56._RUQ_1686
_____CC____GG___
57._RUQ_374
_____CC_GG__AG___
58._SCA_11
_____CTAA_AA_____
 1516171819202122232425262728
_Input profile
AACCAAAGCCAAGGGGAAAAGGAGCCAA
1._MITC-000057
AAACAAGGCCAAAGGGACAAGGAACCAA
2._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
3._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
4._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
5._GC-01-117-6-14
TTGGTTTTCCAACCCCAATTCCAGGGTT
6._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
7._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
8._GC-01-117-6-14
TTGGTT_CCAACCCCAATTCCAGGGTT
9._GC-01-117-6-14
TTGGTTTTCCAACCCCAATTCCAGGGTT
10._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
11._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
12._GC-01-117-6-14
TTGGTTTTCCAACCCCAATTCCAGGGTT
13._GC-01-117-6-14
TTGGTTTTCCAACCCCAATTCCAGGGTT
14._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
15._GC-01-117-6-14
TTGGTTTTCCAACCCCAATTCCAGGGTT
16._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
17._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
18._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
19._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
20._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
21._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
22._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
23._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
24._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
25._GC-08-157-3-56
TTGGTTTT_AACCCCAATTCCAGGGTT
26._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
27._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
28._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
29._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
30._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
31._GC-08-157-3-56
TTGGTTTTCCAACCCCAATTCCAGGGTT
32._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
33._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
34._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
35._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
36._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
37._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
38._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
39._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
40._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
41._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
42._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
43._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
44._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
45._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
46._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
47._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
48._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
49._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
50._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
51._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
52._SCA_11
_GGTT___CC_AATTCCAGGGTT
53._SCA_11
_GGTT_CC_CC_AATTCCAGGGTT
54._RUQ_374
_GTTT_CC_CT_ACTTCCAGGGTT
55._SCA_11
_GTTT_CC_CT_ACTTCCAAGGTT
56._RUQ_1686
_______CCAC_GG__CC
57._RUQ_374
_GT_CC___CCCCTTCCAAGGTT
58._SCA_11
_GGCC_AA_TT_CCCTGGAATTCT
 2930313233343536373839404142
_Input profile
GGAAGGCCGGAAGGAACGAAATAAAGGG
1._MITC-000057
GGAAGGCCCGAGGGAGCGAAAAAAAAGG
2._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
3._SCA_11
CC__CCCCAA_TTCG__AA__
4._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
5._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
6._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
7._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
8._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
9._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
10._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
11._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
12._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
13._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
14._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
15._GC-01-117-6-14
CCTTGGCCCCAAGGTTCGTTATAAAGGG
16._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
17._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
18._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
19._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
20._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
21._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
22._SCA_11
CC__CCCCAA_TTCG__AA__
23._SCA_11
CC__CCCCAA_TTCG__AA__
24._SCA_11
CC__CCCCAA_TTCG__AA__
25._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
26._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
27._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
28._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
29._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
30._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
31._GC-08-157-3-56
CCTTGGCCCCAAGGTTCGTTATAAAGGG
32._SCA_11
CC__CCCCAA_TTCG__AA__
33._SCA_11
CC__CCCCAA_TTCG__AA__
34._SCA_11
CC__CCCCAA_TTCG__AA__
35._SCA_11
CC__CCCCAA_TTCG__AA__
36._SCA_11
CC__CCCCAA_TTCG__AA__
37._SCA_11
CC__CCCCAA_TTCG__AA__
38._SCA_11
CC__CCCCAA_TTCG__AA__
39._SCA_11
CC__CCCCAA_TTCG__AA__
40._SCA_11
CC__CCCCAA_TTCG__AA__
41._SCA_11
CC__CCCCAA_TTCG__AA__
42._SCA_11
CC__CCCCAA_TTCG__AA__
43._SCA_11
CC__CCCCAA_TTCG__AA__
44._SCA_11
CC__CCCCAA_TTCG__AA__
45._SCA_11
CC__CCCCAA_TTCG__AA__
46._SCA_11
CC__CCCCAA_TTCG__AA__
47._SCA_11
CC__CCCCAA_TTCG__AA__
48._SCA_11
CC__CCCCAA_TTCG__AA__
49._SCA_11
CC__CCCCAA_TTCG__AA__
50._SCA_11
CC__CCCCAA_TTCG__AA__
51._SCA_11
CC__CCCCAA_TTCG__AA__
52._SCA_11
CC__CCCCAA_TTCG__AA__
53._SCA_11
CC__CCCCAA_TTCG__AA__
54._RUQ_374
CC__CCCGAG_CTCG__AA__
55._SCA_11
CC__CCCGAG_CTCG__AA__
56._RUQ_1686
__GGAACGAG_______GG
57._RUQ_374
__GGCCCGAG_CT____AAGG
58._SCA_11
CT__ACCCAA_CTGG__TT__
 4344454647484950515253545556
_Input profile
AAGGAGAGAGAACCGGAAAAAACCGGCG
1._MITC-000057
AAGGAAGGAAAA_GGACAAAACCGGCC
2._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
3._SCA_11
AA___AG____AA_GG_CG
4._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAA_GGCG
5._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
6._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
7._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
8._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
9._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
10._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
11._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
12._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
13._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
14._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
15._GC-01-117-6-14
AACCAGAGAGAAGG_AAAAAAGGGGCG
16._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
17._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
18._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
19._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
20._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
21._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
22._SCA_11
AA___AG____AA_GG_CG
23._SCA_11
AA___AG____AA_GG_CG
24._SCA_11
AA___AG____AA___CG
25._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
26._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
27._GC-08-157-3-56
AACCAGAG_AAGG_AAAAAAGGGGCG
28._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
29._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGG_CG
30._GC-08-157-3-56
AACCAGAGAGAAGG_AAAAAAGGGGCG
31._GC-08-157-3-56
AACC_AGAGAAGG_AAAAAAGGGGCG
32._SCA_11
AA___AG____AA_GG_CG
33._SCA_11
AA___AG____AA_GG_CG
34._SCA_11
AA___AG____AA_GG_CG
35._SCA_11
AA___AG____AA_GG_CG
36._SCA_11
AA___AG____AA_GG_CG
37._SCA_11
AA___AG____AA_GG_CG
38._SCA_11
AA___AG____AA_GG_CG
39._SCA_11
AA___AG____AA_GG_CG
40._SCA_11
AA___AG____AA_GG_CG
41._SCA_11
AA___AG____AA_GG_CG
42._SCA_11
AA___AG____AA_GG_CG
43._SCA_11
AA___AG____AA_GG_CG
44._SCA_11
AA___AG____AA_GG_CG
45._SCA_11
AA___AG____AA_GG_CG
46._SCA_11
AA___AG____AA_GG_CG
47._SCA_11
AA___AG____AA_GG_CG
48._SCA_11
AA___AG____AA_GG_CG
49._SCA_11
AA___AG____AA_GG_CG
50._SCA_11
AA___AG____AA_GG_CG
51._SCA_11
AA___AG____AA_GG_CG
52._SCA_11
AA___AG____AA_GG_CG
53._SCA_11
AA________AA_GG_CG
54._RUQ_374
AA___AA____AA_GG_CC
55._SCA_11
AA___AA____AA_GG_CC
56._RUQ_1686
ATCT____CC______GG
57._RUQ_374
AA_____GG__AA_GG_CC
58._SCA_11
AT___GG____CC_TT_CC
 5758596061626364656667686970
_Input profile
CCGGGGAAAAAACCAAAAAACCAACCGG
1._MITC-000057
CCGGGGAAAGAACCAAAAAACCAACCGG
2._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
3._SCA_11
CC__TT__GG_______
4._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
5._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
6._GC-08-157-3-56
CCCCCCTTAAAAGGAATT_GGTTCCCC
7._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
8._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
9._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
10._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
11._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
12._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
13._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
14._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
15._GC-01-117-6-14
CCCCCCTTAAAAGGAATTTTGGTTCCCC
16._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
17._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
18._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
19._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
20._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
21._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
22._SCA_11
CC__TT__GG_______
23._SCA_11
CC__TT__GG_______
24._SCA_11
CC__TT__GG_______
25._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
26._GC-08-157-3-56
CCCCCCTTAA_GGAATTTTGGTTCCCC
27._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
28._GC-08-157-3-56
CCCCCCTTAA_GGAATTTTGGTTCCCC
29._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
30._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
31._GC-08-157-3-56
CCCCCCTTAAAAGGAATTTTGGTTCCCC
32._SCA_11
CC__TT__GG_______
33._SCA_11
CC__TT__GG_______
34._SCA_11
CC__TT__GG_______
35._SCA_11
CC__TT__GG_______
36._SCA_11
CC__TT__GG_______
37._SCA_11
CC__TT__GG_______
38._SCA_11
CC__TT__GG_______
39._SCA_11
CC__TT__GG_______
40._SCA_11
CC__TT__GG_______
41._SCA_11
CC__TT__GG_______
42._SCA_11
CC__TT__GG_______
43._SCA_11
CC__TT__GG_______
44._SCA_11
CC__TT__GG_______
45._SCA_11
CC__TT__GG_______
46._SCA_11
CC__TT__GG_______
47._SCA_11
CC__TT__GG_______
48._SCA_11
CC__TT__GG_______
49._SCA_11
CC__TT__GG_______
50._SCA_11
CC__TT__GG_______
51._SCA_11
CC__TT__GG_______
52._SCA_11
CC__TT__GG_______
53._SCA_11
CC__TT__GG_______
54._RUQ_374
CC__TT__GG_______
55._SCA_11
CC__TT__GG_______
56._RUQ_1686
AA_CC______TT____
57._RUQ_374
CC_CCTT__GGAATT__TTCC_
58._SCA_11
CC__CC__GG_______
 717273747576777879808182  
_Input profile
AAGGAAGGAGCCAGCCGGTTGGAAX_XX_X
1._MITC-000057
AAGGAAGGAGCCGGCCGGTTGGAAX_XX_X
2._GC-08-157-3-56
AA_TTCCAGCC_CCCCTTCCAAX_XX_X
3._SCA_11
__TT____CC_TTCCAAX_XX_X
4._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
5._GC-01-117-6-14
AACC_CCAGCCCTCCCCTTCCAAX_XX_X
6._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
7._GC-08-157-3-56
AA_TTCCAGCCCTCCCCTTCCAAX_XX_X
8._GC-01-117-6-14
AACCTTCC_CCCTCCCCTTCCAAX_XX_X
9._GC-01-117-6-14
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
10._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
11._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
12._GC-01-117-6-14
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
13._GC-01-117-6-14
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
14._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
15._GC-01-117-6-14
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
16._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
17._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
18._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
19._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
20._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
21._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
22._SCA_11
__TT___CTCC_TTCCAAX_XX_X
23._SCA_11
_CC____CTCC_TTCCAAX_XX_X
24._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
25._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
26._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
27._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
28._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
29._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
30._GC-08-157-3-56
AACCTTCCAG_CTCCCCTTCCAAX_XX_X
31._GC-08-157-3-56
AACCTTCCAGCCCTCCCCTTCCAAX_XX_X
32._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
33._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
34._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
35._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
36._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
37._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
38._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
39._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
40._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
41._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
42._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
43._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
44._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
45._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
46._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
47._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
48._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
49._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
50._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
51._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
52._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
53._SCA_11
_CCTT___CTCC_TTCCAAX_XX_X
54._RUQ_374
_CCTT___CCCC_TTCCAAX_XX_X
55._SCA_11
_CCTT___CCCC_TTCCAAX_XX_X
56._RUQ_1686
GGGGCT_______CT_X_XX_X
57._RUQ_374
_CCTT_-CC_____AAX_XX_X
58._SCA_11
_CGCC___TTGG_AACTAAX_XX_X

Input profile: SCA_11 RUQ_1686

 
 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

1._SCA_11 MITC-000057

87.7 %
81 shared markers

 View  View all  Clone  Any
USDA-SHRS, United States of America
 Mars, 2018

2._SCA_11 GC-08-157-3-56

51.9 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

3._SCA_11

51.5 %
33 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 13
 Dapeng Zhang, 2016

4._SCA_11 GC-08-157-3-56

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2
 Mars, 2018

5._SCA_11 GC-01-117-6-14

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

6._SCA_11 GC-08-157-3-56

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10
 Mars, 2018

7._SCA_11 GC-08-157-3-56

51.3 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 18
Notes: 18
 Mars, 2018

8._SCA_11 GC-01-117-6-14

50.6 %
79 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 13
Notes: 13
 Mars, 2018

9._SCA_11 GC-01-117-6-14

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 2
Notes: 2 > FP2
 Mars, 2018

10._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 4
Notes: 4
 Mars, 2018

11._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3
 Mars, 2018

12._SCA_11 GC-01-117-6-14

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 10
Notes: 10 > FP4
 Mars, 2018

13._SCA_11 GC-01-117-6-14

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 3
Notes: 3 > FP3
 Mars, 2018

14._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 5
Notes: 5
 Mars, 2018

15._SCA_11 GC-01-117-6-14

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1 > FP1
 Mars, 2018

16._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 6
Notes: 6
 Mars, 2018

17._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 8
Notes: 8
 Mars, 2018

18._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 9
Notes: 9
 Mars, 2018

19._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 14
Notes: 14
 Mars, 2018

20._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 20
Notes: 20
 Mars, 2018

21._SCA_11 GC-08-157-3-56

50.6 %
81 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 23
Notes: 23
 Mars, 2018

22._SCA_11

50 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 18
 Dapeng Zhang, 2016

23._SCA_11

50 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 9
 Dapeng Zhang, 2016
Population Assignment: 
View Data
 Dapeng Zhang, 2016

24._SCA_11

50 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 2
 Dapeng Zhang, 2016

25._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 1
Notes: 1
 Mars, 2018

26._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 11
Notes: 11
 Mars, 2018

27._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 15
Notes: 15
 Mars, 2018

28._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 19
Notes: 19
 Mars, 2018

29._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 24
Notes: 24
 Mars, 2018

30._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 25
Notes: 25
 Mars, 2018

31._SCA_11 GC-08-157-3-56

50 %
80 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: Tree: 26
Notes: 26
 Mars, 2018

32._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 26
 Dapeng Zhang, 2016

33._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 25
 Dapeng Zhang, 2016

34._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 24
 Dapeng Zhang, 2016

35._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 23
 Dapeng Zhang, 2016

36._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 20
 Dapeng Zhang, 2016

37._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 19
 Dapeng Zhang, 2016

38._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 13
 Dapeng Zhang, 2016

39._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 1 > FP
 Dapeng Zhang, 2016

40._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 10 > F
 Dapeng Zhang, 2016

41._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 2 > FP
 Dapeng Zhang, 2016

42._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 1614 3 > FP
 Dapeng Zhang, 2016

43._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 3
 Dapeng Zhang, 2016

44._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 4
 Dapeng Zhang, 2016

45._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 6
 Dapeng Zhang, 2016

46._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 8
 Dapeng Zhang, 2016

47._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 9
 Dapeng Zhang, 2016

48._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 10
 Dapeng Zhang, 2016

49._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 11
 Dapeng Zhang, 2016

50._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 14
 Dapeng Zhang, 2016

51._SCA_11

48.6 %
35 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 5
 Dapeng Zhang, 2016

52._SCA_11

47.1 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 1
 Dapeng Zhang, 2016

53._SCA_11

47.1 %
34 shared markers

 View  View all  Clone  Any
Mars Center for Cocoa Science, Brazil
Location: 8356 15
 Dapeng Zhang, 2016

54._SCA_11 RUQ_374

42.9 %
35 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2016

55._SCA_11

41.4 %
35 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
Location: Marper D 639
 Dapeng Zhang, 2016

56._SCA_11 RUQ_1686

38.6 %
22 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Location: GBR207
 Jocelyn De Wever et al., 2019

57._SCA_11 RUQ_374

36.1 %
36 shared markers

 View  View all  Clone  Any
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

58._SCA_11

22.9 %
35 shared markers

 View  View all  Clone  Any
International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago
 Dapeng Zhang, 2016

 

  Key to SNP Markers

1Tcm001s00947643 2Tcm003s01336581 3Tcm003s07402719 4Tcm006s26664133 5TcSNP1034
6TcSNP1060 7TcSNP1062 8TcSNP1063 9TcSNP1075 10TcSNP1096
11TcSNP1111 12TcSNP1149 13TcSNP1156 14TcSNP1175 15TcSNP122
16TcSNP1253 17TcSNP1270 18TcSNP1309 19TcSNP1350 20TcSNP1383
21TcSNP1414 22TcSNP1439 23TcSNP144 24TcSNP1442 25TcSNP1458
26TcSNP1484 27TcSNP150 28TcSNP151 29TcSNP1520 30TcSNP154
31TcSNP174 32TcSNP193 33TcSNP226 34TcSNP230 35TcSNP240
36TcSNP242 37TcSNP25 38TcSNP28 39TcSNP316 40TcSNP32
41TcSNP329 42TcSNP364 43TcSNP372 44TcSNP413 45TcSNP418
46TcSNP42 47TcSNP429 48TcSNP430 49TcSNP448 50TcSNP497
51TcSNP521 52TcSNP529 53TcSNP547 54TcSNP560 55TcSNP561
56TcSNP577 57TcSNP591 58TcSNP60 59TcSNP602 60TcSNP619
61TcSNP653 62TcSNP689 63TcSNP723 64TcSNP731 65TcSNP75
66TcSNP751 67TcSNP776 68TcSNP799 69TcSNP823 70TcSNP836
71TcSNP860 72TcSNP872 73TcSNP891 74TcSNP894 75TcSNP899
76TcSNP90 77TcSNP917 78TcSNP929 79TcSNP944 80TcSNP953
81TcSNP994 82TcSNP998